Index Herbariorum




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Table S1. Species names and their authors, plant sources, and geographic origin of the sequenced material; plastid, mitochondrial and nuclear loci sequenced, and GenBank accession numbers of all sequences included in this study. An asterisk (*) marks sequences newly generated for this study. Herbarium acronyms follow Index Herbariorum at http://sciweb.nybg.org/science2/. Papers associated with sequences downloaded from GenBank are cited at the end of the table; sources for sequences from GenBank that lack associated publications were listed as “GenBank”; the dagger symbol (†) indicates that DNA was extracted from herbarium material.



Part 1: Plastid sequences

Taxon

Voucher/Sourcea

Geographic origin of the sequenced material

matK

gene


petB-D spacer

psbB

gene


rbcL

gene


rps4

gene


trnL-F spacer

Cupressaceae

























Actinostrobus acuminatus Parl.

RBGE-E00175079† (E)

Australia: WA

JF725837*

JF725790*

JF725977*

JF725937*

JF725862*

JF725897*

Actinostrobus pyramidalis Miq.

RBGE-19923616 (E)

Australia: WA

JF725831*

JF725783*

JF725970*

JF725931*

EU161500

JF725891*

Athrotaxis cupressoides D.Don

RBGS-870661 (NSW)

Australia: TAS

JF725821*

JF725773*

JF725960*

JF725921*

JF725849*

JF725881*

Athrotaxis laxifolia Hook.

RBGS-850356 (NSW)

Australia: TAS

JF725822*

JF725774*

JF725961*

JF725922*

JF725850*

JF725882*

Athrotaxis selaginoides D.Don

RBGE-E00182207† (E)

Australia: TAS

JF725838*

JF725791*

JF725978*

JF725938*

JF725863*

JF725898*

Austrocedrus chilensis (D.Don) Pic.Serm. & Bizzarri

RBGS-851219 (NSW)

S Chile

JF725823*

JF725775*

JF725962*

JF725923*

EU161501

JF725883*

Callitris canescens (Parl.) S.T.Blake

RBGE-E00171664† (E)

Australia: WA

JF725845*

JF725798*

JF725985*

JF725945*

JF725870*

JF725905*

Callitris drummondii (Parl.) Benth. & Hook.f. ex F.Muell.

RBGE-E00175091† (E)

Australia: WA

JF725839*

JF725792*

JF725979*

JF725939*

JF725864*

JF725899*

Callitris endlicheri (Parl.) F.M.Bailey

RBGE-E00262094† (E)

Australia

JF725832*

JF725784*

JF725971*

JF725932*

JF725857*

JF725892*

Callitris macleayana (F.Muell.) F.Muell.

RBGE-E00210632† (E)

Australia: QLD

JF725833*

JF725785*

JF725972*

JF725933*

JF725858*

JF725893*

Callitris muelleri (Parl.) Benth. & Hook.f. ex F.Muell.

RBGS-941407 (NSW)

Australia: NSW

JF725824*

JF725776*

JF725963*

JF725924*

JF725851*

JF725884*

Callitris preissii Miq.

RBGE-E00166869† (E)

Australia: WA

JF725840*

JF725793*

JF725980*

JF725940*

JF725865*

JF725900*

Callitris rhomboidea R.Br. ex Rich. & A.Rich.

RBGS-CalRho (NSW)

Australia: NSW

JF725825*

JF725777*

JF725964*

JF725925*

JF725852*

JF725885*

Callitris sulcata (Parl.) Schltr.

RBGE-E00215041† (E)

New Caledonia

JF725841*

JF725794*

JF725981*

JF725941*

JF725866*

JF725901*

Callitris verrucosa (A.Cunn. ex Endl.) R.Br. ex Mirb.

RBGE-E00171784† (E)

Australia: SA

JF725842*

JF725795*

JF725982*

JF725942*

JF725867*

JF725902*

Callitropsis nootkatensis (D.Don) Oerst. ex D.P.Little

R. P. Adams-10309 (BAYLU)

Canada: BC

HM023980

HM024076

HM024173

HM024268

HM024353

HM024614

Calocedrus decurrens (Torr.) Florin

RBGE-19913678-A (E)

U.S.A.: California

HM023981

HM024077

HM024174

HM024269

HM024354

HM024532

Calocedrus macrolepis Kurz

J. Q. Liu-KBG-CAM (LZU)

China

HM023982

HM024078

HM024175

HM024270

HM024355

HM024533

Chamaecyparis formosensis Matsum.

RBGE-19763874 (E)

Taiwan

HM023983

HM024079

HM024176

HM024271

HM024356

HM024534

Chamaecyparis lawsoniana (A.Murray) Parl.

J. Q. Liu-TBG-CHL (LZU)

U.S.A.

HM023984

HM024080

HM024177

HM024272

HM024357

HM024535

Chamaecyparis obtusa (Siebold & Zucc.) Endl.

RBGE-19763586-A2 (E)

Japan: Honshu

HM023985

HM024081

HM024178

HM024273

HM024358

HM024536

Chamaecyparis pisifera (Siebold & Zucc.) Endl.

RBGE-19763650-A3 (E)

Japan: Honshu

HM023986

HM024082

HM024179

HM024274

HM024359

HM024537

Chamaecyparis thyoides (L.) Britton, Sterns & Poggenb.

RBGE-E00251815† (E);

Refs. 1-2



U.S.A.: Massachusetts

AY380844

JF725786*

JF725973*

AY380885

JF725859*

AY988178

Cryptomeria japonica D.Don

J. Q. Liu-TBG-CRJ (LZU); GenBank

Japan

JF725811*

JF725763*

JF725950*

JF725911*

AY188272

JF725872*

Cunninghamia lanceolata (Lamb.) Hook.

J. Q. Liu-CunLan (LZU); GenBank

China: Sichuan

JF725810*

JF725762*

JF725949*

JF725910*

EF053202

JF725871*

Cupressus atlantica Gaussen

RBGE-19980816 (E)

Morocco

HM023987

HM024083

HM024180

HM024275

HM024360

HM008379

Cupressus cashmeriana Royle ex Carrière

G. S. Miehe 00-143-03 (MB)

Bhutan

HM023988

HM024084

HM024181

AY988240

HM024361

HM008374

Cupressus chengiana S.Y.Hu

J. Q. Liu-2732-8 (LZU)

China: Sichuan

HM023989

HM024085

HM024182

HM024276

HM024362

HM008368

Cupressus duclouxiana Hickel

J. Q. Liu-05038-6 (LZU)

China: Yunnan

HM023990

HM024086

HM024183

HM024277

HM024363

HM008370

Cupressus funebris Endl.

J. Q. Liu-2005003-1 (LZU);

Ref. 2


China: Sichuan

HM023991

HM024087

HM024184

AY988244

HM024364

HM008363

Cupressus gigantea W.C.Cheng & L.K.Fu

J. Q. Liu-1170-1 (LZU); Ref. 2

China: Xizang

HM023992

HM024088

HM024185

AY988246

HM024365

HM008372

Cupressus jiangeensis N.Zhao

J. Q. Liu-2005007 (LZU); Ref. 2

China: Sichuan

HM023993

HM024089

HM024186

AY988249

HM024366

HM008365

Cupressus sempervirens L.

RBGE-19752308-B (E)

Croatia

HM023994

HM024090

HM024187

HM024278

HM024367

HM008376

Cupressus torulosa D.Don

G. S. Miehe 99-89-06 (MB)

Nepal

HM023995

HM024091

HM024188

AY988257

HM024368

HM008374

Diselma archeri Hook.f.

RBGS-850340 (NSW)

Australia: TAS

JF725826*

JF725778*

JF725965*

JF725926*

JF725853*

JF725886*

Fitzroya cupressoides (Molina) I.M.Johnst.

RBGE-19991747-F (E)

S Chile

JF725816*

JF725768*

JF725955*

JF725916*

AY188275

JF725876*

Fokienia hodginsii A.Henry & H.H.Thomas

J. Q. Liu-KBG-FOH (LZU)

China

HM023996

HM024092

HM024189

HM024279

HM024369

AY988216

Glyptostrobus pensilis K.Koch

J. Q. Liu-GlyPen (LZU); GenBank

China: Guangdong

JF725818*

JF725770*

JF725957*

JF725918*

EF053204

JF725878*

Hesperocyparis abramsiana (C.B.Wolf) Bartel

RBGE-19792384-B (E)

U.S.A.

HM023997

HM024093

HM024190

HM024280

HM024370

HM024538

Hesperocyparis arizonica (Greene) Bartel

RBGE-19911440 (E); Ref. 2

Mexico

HM023998

HM024094

HM024191

AY988253

HM024371

HM024539

Hesperocyparis bakeri (Jeps.) Bartel

RBGE-19970190 (E); Ref. 2

U.S.A.: California

HM023999

HM024095

HM024192

AY988237

HM024372

HM008375

Hesperocyparis forbesii (Jeps.) Bartel

RBGE-E00190536† (E)

U.S.A.: California

HM024000

HM024096

HM024193

HM024281

HM024373

HM024540

Hesperocyparis glabra (Sudw.) Bartel

RBGE-19241011A (E)

U.S.A.: Arizona

HM024001

HM024097

HM024194

HM024282

HM024374

HM024541
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