GenBank Accession Number




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Supplemental Table 1. Taxa included in phylogenetic analyses with APGII ordinal classification (APG II, 2003) and GenBank accession numbers.

Taxon

APGII Order

GenBank Accession Number

Gymnosperms – Outgroups










Cycas micronesica

Cycadales

UE016802-EU016882




Pinus koraiensis

Pinales

NC_004677




Pinus thunbergii

Pinales

NC_001631




Ginkgo biloba

Ginkgoales

DQ069337-DQ069702, EU016963-EU016982

Early Diverging Angiosperms










Amborella trichopoda

Amborellales

NC_005086




Calycanthus floridus

Laurales

NC_004993




Chloranthus spicatus

Chloranthales

EF380352




Drimys granadensis

Canellales

NC_008456




Illicium oligandrum

Austrobaileyales

EF380354




Liriodendron tulipifera

Magnoliales

NC_008326




Nuphar advena

Nymphaeales

NC_008788




Nymphaea alba

Nymphaeales

NC_006050




Piper coenoclatum

Piperales

NC_008457

Monocots










Acorus americanus

Acorales

DQ069337-DQ069702, EU0167701-EUO16720




Acorus calamus

Acorales

NC_007407




Agrostis stolonifera

Poales

NC_008591




Dioscorea elephantipes

Dioscoreales

EF380353




Elaeis oleifera

Arecales

EU016883-EU016962




Festuca arundinacea

Poales

NC_011713




Hordeum vulgare

Poales

NC_008590




Lemna minor

Alismatales

NC_010109




Lolium perenne

Poales

NC_009950




Musa acuminata

Zingiberales

EU016983-EU017063




Oryza sativa

Poales

NC_001320




Phalaenopsis aphrodite

Asparagales

NC_007499




Saccharum officinarum

Poales

NC_006084




Sorghum bicolor

Poales

NC_008602




Triticum aestivum

Poales

NC_002762




Typha latifolia

Poales

DQ069337-DQ069702, EU017296-EU017315




Yucca schidigera

Asparagales

DQ069337-DQ069702, EU016681-EU016700




Zea mays

Poales

NC_001666

Eudicots










Aethionema cordifolium

Brassicales

NC_009265




Aethionema grandiflorum

Brassicales

NC_009266




Anethum graveolens

Apiales

EU016721-EU016801



Arabidopsis thaliana

Brassicales

NC_000932




Arabis hirsuta

Brassicales

NC_009268



Atropa belladonna

Solanales

NC_004561




Barbarea verna

Brassicales

NC_009269




Brassica rapa

Brassicales

DQ231548




Buxus microphylla

Buxales

EF380351




Capsella bursa-pastoris

Brassicales

NC_009270




Carica papaya

Brassicales

NC_010323




Castanea mollissima

Fagales

HQ336406




Ceratophllum demersum

Ceratophyllales

NC_009962




Cicer arietinum

Fabales

NC_011163




Citrus sinensis

Sapindales

NC_008334




Coffea arabica

Gentianales

NC_008535




Crucihimalaya wallichii

Brassicales

NC_009271




Cucumis sativus

Cucurbitales

NC_007144




Cuscuta exaltata

Solanales

NC_009963




Cuscuta reflexa

Solanales

NC_009766




Daucus carota

Apiales

NC_008325




Draba nemorosa

Brassicales

NC_009272




Eucalyptus globulus

Myrtales

NC_008115




Fagopyrum esculentum

Caryophyllales

NC_010776




Glycine max

Fabales

NC_007942




Gossypium barbadense

Malvales

NC_008641




Gossypium hirsutum

Malvales

NC_007944




Guizotia abyssinica

Asterales

NC_010601




Helianthus annuus

Asterales

NC_007977




Ipomoea purpurea

Solanales

NC_009808




Jasminum nudiflorum

Lamiales

NC_008407




Lactuca sativa

Asterales

DQ383816




Lepidium virginicum

Brassicales

NC_009273




Lobularia maritima

Brassicales

NC_009274



Lotus corniculatus

Fabales

NC_002694




Manihot esculenta

Malphigiales

NC_010433



Medicago truncatula

Fabales

NC_003119




Morus indica

Rosales

NC_008359




Nandina domestica

Ranunculales

NC_008336




Nasturtium officinale

Brassicales

NC_009275




Nicotiana sylvestris

Solanales

NC_007500



Nicotiana tabacum

Solanales

NC_001879




Nicotiana tomentosus

Solanales

NC_007602




Oenothera argillicola

Myrtales

NC_010358




Oenothera biennis

Myrtales

NC_010361



Oenothera elata

Myrtales

NC_002693




Oenothera glazioviana

Myrtales

NC_010360




Oenothera parviflora

Myrtales

NC_010362




Oltmannsiellopsis viridis

Brassicales

NC_008099




Panax schinseng

Apiales

NC_006290




Passiflora biflora

Malphigiales

EU017064-EU017138




Pelargonium x hortorum

Geraniales

NC_008454




Phaseolus vulgaris

Fabales

NC_009259




Platanus occidentalis

Proteales

NC_008335




Populus alba

Malphigiales

NC_008235




Populus trichocarpa

Malphigiales

NC_009143




Prunus persica

Rosales

HQ336405



Ranunculus macranthus

Ranunculales

NC_008796




Solanum lycopersicum

Solanales

DQ347959




Solanum bulbocastanum

Solanales

NC_007943




Solanum tuberosum

Solanales

NC_008096



Spinacia oleracea

Caryophyllales

NC_002202




Theobroma cacao

Malvales

HQ336404




Trachelium caeruleum

Asterales

NC_010442




Trifolium subterraneum

Fabales

NC_011828




Vitis vinifera

Vitales

NC_007957


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